# Page Not Found

The URL `software/on-instrument-analysis-software/software-on-instrument-analysis-software-troubleshooting-list/000009008` does not exist. This page may have been moved, renamed, or deleted.

## Suggested Pages

You may be looking for one of the following:
- [Creating a custom DRAGEN reference genome for NextSeq1000/2000 analysis](https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-troubleshooting-list/000007055.md)
- [How to remove a BCL file from analysis in MiSeq Reporter or Local Run Manager](https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-troubleshooting-list/000002415.md)
- [Local Run Manager v3 with MiSeq Control Software v4 Introduction Support Webinar Video](https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-reference_material-list/000008078.md)
- [Can the MiSeq System generate FASTQ files?](https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-faq-list/000002606.md)
- [如何使用MiSeq Reporter从未完成的run中创建出FASTQ文件](https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-reference_material-list/000007401.md)

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### Option 1 — Ask a question (recommended)

Perform an HTTP GET request on the documentation index with the `ask` parameter, and the optional `goal` parameter:

```
GET https://knowledge.illumina.com/software/on-instrument-analysis-software/software-on-instrument-analysis-software-troubleshooting-list/000007055.md?ask=<question>&goal=<end_goal>
```

`ask` is the immediate question: it should be specific, self-contained, and written in natural language.
`goal` is optional and describes the broader end goal you are ultimately trying to accomplish on behalf of the user. GitBook uses it to tailor the answer towards what is most useful for that goal.

The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

### Option 2 — Browse the documentation index

Full index: https://knowledge.illumina.com/sitemap.md

Use this to discover valid page paths or navigate the documentation structure.

### Option 3 — Retrieve the full documentation corpus

Full export: https://knowledge.illumina.com/llms-full.txt

Use this to access all content at once and perform your own parsing or retrieval. It will be more expensive.

## Tips for requesting documentation

Prefer `.md` URLs for structured content, append `.md` to URLs (e.g., `/software/on-instrument-analysis-software/software-on-instrument-analysis-software-troubleshooting-list/000007055.md`).

You may also use `Accept: text/markdown` header for content negotiation.