How to skip the pre run check confirmation on the NextSeq 500/550

The following are instructions to start sequencing automatically after a successful automatic pre-check on the NextSeq 500/550 systems.

If the system has not been configured to skip the Pre-Run Check Confirmation as described in this article, the user will need to select Start to begin sequencing once the pre-check completes.

To set up the instrument to skip the Pre-Run Check Confirmation:

  1. In the Home Screen, select Manage Instrument.

  2. Select System Customization.

  3. Select Skip Pre-Run Check Confirmation checkbox.

  4. Select Save to save setting and exit the screen.

For any feedback or questions regarding this article (Illumina Knowledge Article #3187), contact Illumina Technical Support techsupport@illumina.com.

Last updated

© 2023 Illumina, Inc. All rights reserved. All trademarks are the property of Illumina, Inc. or their respective owners. Trademark information: illumina.com/company/legal.html. Privacy policy: illumina.com/company/legal/privacy.html