> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/instrumentation/miseq/instrumentation-miseq-troubleshooting-list.md).

# Troubleshooting

Instrumentation > MiSeq > Troubleshooting

* [Troubleshooting "Conflict" errors at the end of MiSeq runs](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000008345.md)
* [Troubleshooting "Initialize Cameras before capturing images" error on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000007442.md)
* [Troubleshooting "Primary Analysis Not Ready" errors during Pre-run Checks on MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000003755.md)
* [Troubleshooting "TEC2SERVO unrecognize char" error during MiSeq Control Software initialization](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000002865.md)
* [Troubleshooting "Unsuccessfully attempted to launch module type" error with LRM v3 on MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000003872.md)
* [Troubleshooting "Y home sensor never tripped" error on MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000002353.md)
* [Troubleshooting "file is not properly formatted" warning on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000009180.md)
* [Troubleshooting 'Index outside the bounds of the array' error on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000001432.md)
* [Troubleshooting Invalid Role Errors after Post-Run Washes on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000009173.md)
* [Troubleshooting MiSeqOverride.cfg Errors on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000003299.md)
* [Troubleshooting Sipdown Errors on the MiSeq video](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000006824.md)
* [Troubleshooting Stalled Flow Rate Check on the MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000009288.md)
* [Troubleshooting scratched or damaged flow cells on MiSeq](/instrumentation/miseq/instrumentation-miseq-troubleshooting-list/000003192.md)


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