DesignStudio Microarray Assay Designer Input Target File Templates

When creating an iSelect custom design, upload an input target file containing a list of the targets in a specific format. Input Target file templates are available to download from DesignStudio Microarray Assay Designer (MyIllumina login required).

Files

Region List (Human only)

Specify a chromosome, start coordinate, and end coordinate for each target.

Identity File (Human only)

Specify an rsID from dbSNP for each target.

Gene List (Human only)

Specify a gene name (RefSeq accession IDs or HUGO identifiers) as well as bases upstream/downstream for each target.

Existing Design

Specify an ILMN ID from previously designed iSelect, XT iSelect, or Commercial+ assays for each target.

Sequence List

Specify a sequence in context of a SNP or Indel for each target.

Score File

Specify an assay from any DesignStudio Microarray Assay Designer (or ADT) generated Score File for each target.

Additional Resources:

• DesignStudio Microarray Assay Designer Documentation

• Recorded Webinar: Infinium Genotyping: Introduction to DesignStudio Microarray Assay Designer for Custom and Semi-Custom Infinium Genotyping Arrays

For any feedback or questions regarding this article (Illumina Knowledge Article #7910), contact Illumina Technical Support [e-mail].