> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/software/on-premises-software/software-on-premises-software-reference_material-list.md).

# Reference Material

Software > On Premises Software > Reference Material

* [Bcl2Fastq v2+Introduction Support Webinar Video](/software/on-premises-software/software-on-premises-software-reference_material-list/000008093.md)
* [Considerations for using a DRAGEN Server with an automated job scheduler](/software/on-premises-software/software-on-premises-software-reference_material-list/000001821.md)
* [DRAGEN TruSight Oncology 500 (TSO500) co install options](/software/on-premises-software/software-on-premises-software-reference_material-list/000009369.md)
* [How to create a Project connector in Illumina Connected Analytics Video](/software/on-premises-software/software-on-premises-software-reference_material-list/000006953.md)
* [How to demultiplex a run without using either the i7 index or the i5 index using bcl2fastq2](/software/on-premises-software/software-on-premises-software-reference_material-list/000003145.md)
* [How to install an Illumina Connected Analytics service connector on Windows Video](/software/on-premises-software/software-on-premises-software-reference_material-list/000006952.md)
* [How to install an Illumina Connected Analytics service connector on macOS Video](/software/on-premises-software/software-on-premises-software-reference_material-list/000007123.md)
* [How to parse the Counts sparse matrix file output by the DRAGEN scRNA and scATAC pipelines](/software/on-premises-software/software-on-premises-software-reference_material-list/000007911.md)
* [How to update the DRAGEN BIOS version to reduce v4 server fan noise](/software/on-premises-software/software-on-premises-software-reference_material-list/000009378.md)
* [Information on BCL Convert software releases](/software/on-premises-software/software-on-premises-software-reference_material-list/000009158.md)
* [Investigation of Log4j Vulnerability with Emedgene](/software/on-premises-software/software-on-premises-software-reference_material-list/000006338.md)
* [Recommendation to abort ongoing DRAGEN analysis](/software/on-premises-software/software-on-premises-software-reference_material-list/000008557.md)
* [Running DRAGEN analyses with ORA files as input](/software/on-premises-software/software-on-premises-software-reference_material-list/000007955.md)


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