> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/library-preparation/general/library-preparation-general-reference_material-list.md).

# Reference Material

Library Preparation > General > Reference Material

* [Adapter dimers的形成原因、影响及去除方法](/library-preparation/general/library-preparation-general-reference_material-list/000007418.md)
* [AmpliSeq for Illumina Dermatology Research Panel v2 product page, support page, and manifest links](/library-preparation/general/library-preparation-general-reference_material-list/000005192.md)
* [Amplicon Sequencing Introduction Support Webinar Video](/library-preparation/general/library-preparation-general-reference_material-list/000008059.md)
* [Bead handling best practices](/library-preparation/general/library-preparation-general-reference_material-list/000002136.md)
* [Best Practices for Ribo Zero Depletion using the TruSeq Stranded Total RNA Protocol](/library-preparation/general/library-preparation-general-reference_material-list/000001538.md)
* [Best practices for LNB1 handling in bead based normalization for TruSight Oncology 500 workflows](/library-preparation/general/library-preparation-general-reference_material-list/000002721.md)
* [Best practices for handling magnetic beads used with Illumina RNA library preparation kits](/library-preparation/general/library-preparation-general-reference_material-list/000003305.md)
* [Best practices for storage of bead normalized Nextera XT libraries](/library-preparation/general/library-preparation-general-reference_material-list/000001146.md)
* [Best practices for using Sodium Hydroxide with Illumina sequencing systems](/library-preparation/general/library-preparation-general-reference_material-list/000006560.md)
* [Choosing a Library Loading Concentration for Illumina Sequencing Video](/library-preparation/general/library-preparation-general-reference_material-list/000006959.md)
* [Custom primer requirements for the Illumina DNA PCR Free Prep, Tagmentation kit](/library-preparation/general/library-preparation-general-reference_material-list/000003343.md)
* [Fusion Genes kits for detection and lists of targeted genes](/library-preparation/general/library-preparation-general-reference_material-list/000003067.md)
* [How Do I Optimize Amplicon Sequencing Data? Part 1 Video](/library-preparation/general/library-preparation-general-reference_material-list/000005726.md)
* [How Do I Optimize Amplicon Sequencing Data? Part 2 Video](/library-preparation/general/library-preparation-general-reference_material-list/000005742.md)
* [How short inserts affect sequencing performance](/library-preparation/general/library-preparation-general-reference_material-list/000003874.md)
* [How to Use the Illumina Library Prep Kit Selector Video](/library-preparation/general/library-preparation-general-reference_material-list/000006960.md)
* [How to find a Safety Data Sheet](/library-preparation/general/library-preparation-general-reference_material-list/000003798.md)
* [How to use the Illumina Sequencing Coverage Calculator Video](/library-preparation/general/library-preparation-general-reference_material-list/000005861.md)
* [Illumina DNA Prep library preparation for the MiSeq i100 Series 25M Reagent Kit (1000 cycles)](/library-preparation/general/library-preparation-general-reference_material-list/000010102.md)
* [Illumina Single Cell 3' RNA Prep, T20 Workflow (Video)](/library-preparation/general/library-preparation-general-reference_material-list/000010035.md)
* [Illumina library applications for 2x500 bp sequencing on the MiSeq i100](/library-preparation/general/library-preparation-general-reference_material-list/000009958.md)
* [Index content for the TruSeq DNA and RNA Single Index kits, Sets A and B](/library-preparation/general/library-preparation-general-reference_material-list/000002510.md)
* [Indexed Sequencing Overview for Paired End Flow Cells](/library-preparation/general/library-preparation-general-reference_material-list/000002099.md)
* [Information on the Illumina Tagment DNA TDE1 Enzyme and Buffer Kits](/library-preparation/general/library-preparation-general-reference_material-list/000002753.md)
* [Input recommendations and considerations for Illumina DNA Prep with Enrichment (S) Tagmentation](/library-preparation/general/library-preparation-general-reference_material-list/000001554.md)
* [Library Prep Bead Handling Workflows Best Practices LNB1/2/3 (Video)](/library-preparation/general/library-preparation-general-reference_material-list/000010037.md)
* [Library Prep Bead Handling Workflows Best Practices SMB (Video)](/library-preparation/general/library-preparation-general-reference_material-list/000010038.md)
* [Library Prep Bead Handling Workflows Best Practices SPB/IPB Video](/library-preparation/general/library-preparation-general-reference_material-list/000010040.md)
* [Library denaturation and compatibility for the iSeq 100 system](/library-preparation/general/library-preparation-general-reference_material-list/000001705.md)
* [Metagenomics Part I Introduction to Library Preparation and Sequencing Support Webinar Video](/library-preparation/general/library-preparation-general-reference_material-list/000008057.md)
* [Optimal Cluster Density Best Practices Video](/library-preparation/general/library-preparation-general-reference_material-list/000005778.md)
* [PhiX Control v3文库是什么，它在Illumina下一代测序中起到什么作用？](/library-preparation/general/library-preparation-general-reference_material-list/000007130.md)
* [Plate layout for TruSeq Unique Dual (UD) indexes](/library-preparation/general/library-preparation-general-reference_material-list/000002337.md)
* [Read Depth Requirements for Illumina Rapid RNA kits](/library-preparation/general/library-preparation-general-reference_material-list/000010216.md)
* [Recommendations for sequencing Illumina 16S libraries with the NextSeq 1000/2000 600 cycle kits](/library-preparation/general/library-preparation-general-reference_material-list/000007461.md)
* [Recommended quality control of FFPE samples for Illumina FFPE supported library preparation kits](/library-preparation/general/library-preparation-general-reference_material-list/000001941.md)
* [Resources for Illumina Rapid RNA kits](/library-preparation/general/library-preparation-general-reference_material-list/000010220.md)
* [Resources for getting started with Illumina Next Generation Sequencing (NGS)](/library-preparation/general/library-preparation-general-reference_material-list/000002171.md)
* [Respiratory Virus Enrichment Kit sequencing recommendations and public data resources](/library-preparation/general/library-preparation-general-reference_material-list/000003426.md)
* [Sequences to use for adapter trimming](/library-preparation/general/library-preparation-general-reference_material-list/000001314.md)
* [Sequencing FFPE Samples Introduction Support Webinar Video](/library-preparation/general/library-preparation-general-reference_material-list/000008050.md)
* [Sequencing Method Explorer：哪种二代测序（NGS）方法最适合我的研究？](/library-preparation/general/library-preparation-general-reference_material-list/000007136.md)
* [Spiking custom primers into the Illumina sequencing primers](/library-preparation/general/library-preparation-general-reference_material-list/000001542.md)
* [Understanding unique dual indexes (UDI) and associated library prep kits](/library-preparation/general/library-preparation-general-reference_material-list/000002344.md)
* [Using Sequencing Method Explorer to identify suitable NGS methods for research](/library-preparation/general/library-preparation-general-reference_material-list/000001245.md)
* [Why pooling libraries at the same concentration does not change the final pool concentration](/library-preparation/general/library-preparation-general-reference_material-list/000008258.md)
* [i7 and i5 indexes in each Nextera XT index kit](/library-preparation/general/library-preparation-general-reference_material-list/000002230.md)
* [了解唯一双标签（UDI）与相关建库试剂盒](/library-preparation/general/library-preparation-general-reference_material-list/000007133.md)
* [将定制引物掺入到Illumina测序引物中](/library-preparation/general/library-preparation-general-reference_material-list/000007451.md)
* [手动文库浓度标准化最佳操作](/library-preparation/general/library-preparation-general-reference_material-list/000007111.md)
* [是否可以混合不同类型的文库并同时进行测序？](/library-preparation/general/library-preparation-general-reference_material-list/000007309.md)
* [最小化 TruSeq Stranded Total RNA 文库中rRNA污染的最佳操作](/library-preparation/general/library-preparation-general-reference_material-list/000007416.md)
* [末端接头剪切（adapter trimming）时需要用到的序列](/library-preparation/general/library-preparation-general-reference_material-list/000007122.md)


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