DRAGEN installation failed due to lack of disk space in root volume

Sometimes the error below can occur during installation of DRAGEN software:

Installing edico-4.2.4-15.el7.x86_64.rpm...

warning: edico-4.2.4-15.el7.x86_64.rpm: Header V4 RSA/SHA256 Signature, key ID 96ca168c: NOKEY

Preparing... ################################# [100%]

installing package edico-4.2.4-15.el7.x86_64 needs 1975MB on the / filesystem

The error indicates the a disk space issue on the root volume. When it writes that it needs 1975MB on /, it doesn’t mean that’s the total size of the incoming RPM. It means it is 1975MB short after extraction.

A system that didn’t have trouble with the installer for the old version could have trouble with the new one.

If that is the case, user can try using the --target option:

sudo /staging/dragen-version.run --target /staging

That will tell it to extract its temporary data to /staging (rather than /tmp) and it might get user past the disk space issue. If that does not solve the issue, likely the only solution is to actually free space on the root volume.

For any feedback or questions regarding this article (Illumina Knowledge Article #8926), contact Illumina Technical Support techsupport@illumina.com.

Last updated

© 2023 Illumina, Inc. All rights reserved. All trademarks are the property of Illumina, Inc. or their respective owners. Trademark information: illumina.com/company/legal.html. Privacy policy: illumina.com/company/legal/privacy.html