Comment on page

Enabling run storage and analysis in BaseSpace for MiSeq runs

To send run data to BaseSpace Sequence Hub, navigate to the MiSeq Control Software (MCS) and select 'Sequence'. The following screen prompts for selection of BaseSpace run monitoring and/or storage. BaseSpace account credentials must be entered to send run to BaseSpace.
Example Interface MCS v2:
MCS v3.1:
MCS v4:
Note: The MiSeq must have a working internet connection in order to send data to BaseSpace. Information regarding the IT setup of instruments for BaseSpace access can be found in the System Guide and Site Prep Guide can be found at MiSeq Product Documentation.
For any feedback or questions regarding this article (Illumina Knowledge Article #3618), contact Illumina Technical Support [email protected].
© 2023 Illumina, Inc. All rights reserved. All trademarks are the property of Illumina, Inc. or their respective owners. Trademark information: Privacy policy: