# Reference Material

Software > Cloud Software > Reference Material

* [BaseSpace Command Line Tools for Basic Analysis Part I Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008080.md)
* [BaseSpace Command Line Tools for Basic Analysis Part II Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008082.md)
* [BaseSpace Data Model Explained](/software/cloud-software/software-cloud-software-reference_material-list/000007009.md)
* [BaseSpace Informatics Suite Intro to Cohort Analyzer and Correlation Engine Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008089.md)
* [BaseSpace Sequence Hub Introduction and Analysis Overview Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008087.md)
* [BaseSpace Sequence Hub informational resources](/software/cloud-software/software-cloud-software-reference_material-list/000002876.md)
* [DRAGEN Enrichment App in BaseSpace](/software/cloud-software/software-cloud-software-reference_material-list/000003686.md)
* [DRAGEN Metagenomics Pipeline in BaseSpace general information](/software/cloud-software/software-cloud-software-reference_material-list/000003688.md)
* [Enrichment Data Analysis Introduction Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008090.md)
* [How to Analyze Data using BaseSpace DRAGEN COVID Lineage App Video](/software/cloud-software/software-cloud-software-reference_material-list/000006961.md)
* [How to Requeue Analysis for a NextSeq 1000/2000 run using BaseSpace BCL Convert Video](/software/cloud-software/software-cloud-software-reference_material-list/000006955.md)
* [How to Requeue a Run using BaseSpace Sequence Hub Video](/software/cloud-software/software-cloud-software-reference_material-list/000006956.md)
* [How to authenticate BaseSpace CLI to another region or Enterprise domain](/software/cloud-software/software-cloud-software-reference_material-list/000005560.md)
* [How to concatenate the FASTQ files from different lanes](/software/cloud-software/software-cloud-software-reference_material-list/000002035.md)
* [How to configure Single Sign On (SSO) for an Illumina Enterprise domain using Entra ID](/software/cloud-software/software-cloud-software-reference_material-list/000005972.md)
* [How to configure Single Sign On (SSO) for an Illumina Enterprise domain using Okta](/software/cloud-software/software-cloud-software-reference_material-list/000006210.md)
* [How to delete a variant with API in Emedgene Curate](/software/cloud-software/software-cloud-software-reference_material-list/000009725.md)
* [How to download FASTQs from specific lanes using Basespace CLI](/software/cloud-software/software-cloud-software-reference_material-list/000006973.md)
* [How to download only FASTQs from a BaseSpace project using BaseSpace CLI](/software/cloud-software/software-cloud-software-reference_material-list/000003376.md)
* [How to download specific file types when downloading runs from BaseSpace using BaseSpace CLI](/software/cloud-software/software-cloud-software-reference_material-list/000003154.md)
* [How to edit a sample sheet and requeue an analysis in BaseSpace Sequence Hub](/software/cloud-software/software-cloud-software-reference_material-list/000001321.md)
* [How to find the Demultiplexing Summary and SampleSheetUsed in BaseSpace?](/software/cloud-software/software-cloud-software-reference_material-list/000003652.md)
* [How to get started with BaseSpace Command Line Interface (CLI) Video](/software/cloud-software/software-cloud-software-reference_material-list/000005593.md)
* [How to import files into a BaseSpace Project using the web Interface](/software/cloud-software/software-cloud-software-reference_material-list/000003651.md)
* [How to install the BaseSpace Sequence Hub Downloader on Mac OS](/software/cloud-software/software-cloud-software-reference_material-list/000003049.md)
* [How to invite users to an Enterprise domain workgroup, via a collaborative Enterprise domain account](/software/cloud-software/software-cloud-software-reference_material-list/000005878.md)
* [How to launch any app in BaseSpace using BaseSpace Command Line Interface (CLI)](/software/cloud-software/software-cloud-software-reference_material-list/000007759.md)
* [How to launch the DRAGEN COVID Lineage app using BaseSpace CLI?](/software/cloud-software/software-cloud-software-reference_material-list/000005230.md)
* [How to list BaseSpace entities using BaseSpace CLI](/software/cloud-software/software-cloud-software-reference_material-list/000003682.md)
* [How to manage status.illumina.com subscriptions](/software/cloud-software/software-cloud-software-reference_material-list/000009049.md)
* [How to requeue (re launch) the autolaunch analysis on BaseSpace](/software/cloud-software/software-cloud-software-reference_material-list/000008562.md)
* [How to set the default location for uploaded runs to BaseSpace](/software/cloud-software/software-cloud-software-reference_material-list/000001847.md)
* [How to share BaseSpace sequencing runs and project data using 'Get Link' option](/software/cloud-software/software-cloud-software-reference_material-list/000001597.md)
* [How to unlock a Biosample in BaseSpace that is locked due to Biosample Data Aggregation](/software/cloud-software/software-cloud-software-reference_material-list/000003653.md)
* [How to upload a run to BaseSpace using BaseSpace Command Line Interface (CLI)](/software/cloud-software/software-cloud-software-reference_material-list/000003298.md)
* [How to use the DRAGEN TSO500 v1.1/DRAGEN TSO500 ctDNA v1.2 pipelines on ICA using FASTQ files](/software/cloud-software/software-cloud-software-reference_material-list/000007098.md)
* [How to use the Resources page to add custom reference files for Run Planning for NovaSeq X/X Plus runs](/software/cloud-software/software-cloud-software-reference_material-list/000008500.md)
* [Instructions for using BaseSpace CLI on Windows to upload runs](/software/cloud-software/software-cloud-software-reference_material-list/000007950.md)
* [Investigation of Log4j Vulnerability with BaseSpace Sequence Hub (BSSH) Cloud](/software/cloud-software/software-cloud-software-reference_material-list/000006337.md)
* [Investigation of Log4j Vulnerability with Illumina Connected Analytics (ICA)](/software/cloud-software/software-cloud-software-reference_material-list/000006343.md)
* [Investigation of Log4j Vulnerability with TruSight Software Suite (TSS)](/software/cloud-software/software-cloud-software-reference_material-list/000006341.md)
* [Panel of Normals TruSight Hereditary Cancer Panel datasets for copy number variations in BaseSpace](/software/cloud-software/software-cloud-software-reference_material-list/000007929.md)
* [RNA Sequencing Part III Introduction to Analysis Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008079.md)
* [Reference genome and target regions BED file for the DRAGEN PopGen app](/software/cloud-software/software-cloud-software-reference_material-list/000007889.md)
* [Transferring data between a personal account and a Professional workgroup in BaseSpace Sequence Hub](/software/cloud-software/software-cloud-software-reference_material-list/000001798.md)
* [TruSight Oncology 500 version 2 Analysis Overview Support Webinar Video](/software/cloud-software/software-cloud-software-reference_material-list/000008077.md)
* [Uploading Runs BaseSpace Command Line Interface (CLI) Video](/software/cloud-software/software-cloud-software-reference_material-list/000005857.md)
* [Uploading and downloading FASTQ files with BaseSpace CLI Video](/software/cloud-software/software-cloud-software-reference_material-list/000005860.md)
* [What is restricted when a BaseSpace Basic user exceeds 1TB storage limit](/software/cloud-software/software-cloud-software-reference_material-list/000005662.md)
* [Which BaseSpace Subscription is needed to process Illumina 3' Single Cell RNA Samples](/software/cloud-software/software-cloud-software-reference_material-list/000009794.md)
* [Which BaseSpace apps and features use Illumina Connected Analytics](/software/cloud-software/software-cloud-software-reference_material-list/000009045.md)
* [使用BaseSpace基因云计算平台和bcl2fastq2 2.17以及以上版本软件时，如何排查拆分异常情况](/software/cloud-software/software-cloud-software-reference_material-list/000007134.md)


---

# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://knowledge.illumina.com/software/cloud-software/software-cloud-software-reference_material-list.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
