> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/software/local-run-manager/software-local-run-manager-reference_material-list/000003678.md).

# How to Specify Adapters for Trimming in Local Run Manager

**How to Specify Adapters for Trimming in Local Run Manager**

1. From the Module-Specific Settings section of the Create Run screen, select "Show Advanced Settings".
2. Select "+ Add custom setting."
3. In the custom setting field, enter the setting name, in this case: "Adapter."
4. In the setting value field, enter the setting value. In order to specify 2 different adapter sequences for Read 1, type in the two sequences separated with a plus (+) sign. These will be assessed as separate adapters.\
   ![](https://761066130-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FGM9W2DuBTgEXv1ClCm8H%2Fuploads%2Fgit-blob-33b6e2c4fbaf6612e5f922de229f24d1673532fe%2Fimage1.png?alt=media\&token=87302246-8253-4b6c-978e-60cb7d85c284)

![](https://761066130-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FGM9W2DuBTgEXv1ClCm8H%2Fuploads%2Fgit-blob-c40a2f7bc2313fb137603977c7e6ed2301bc3e75%2Fimage2.png?alt=media\&token=c87c8e0f-53e0-47fa-8f44-a6c72fc5aa9e)\
5\. If a Read 2 adapter trimming sequence is also needed, repeat steps 2 - 4, but use the setting name "AdapterRead2." In order to specify 2 different adapter sequences for Read 2, type in the two sequences separated with a plus (+) sign. These will be assessed as separate adapters. ![](https://761066130-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FGM9W2DuBTgEXv1ClCm8H%2Fuploads%2Fgit-blob-46a6f8e1a8b9335909d433eabafb99c8dfc964cc%2Fimage3.png?alt=media)\
6\. To remove a setting, select the "X".

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| *For any feedback or questions regarding this article (Illumina Knowledge Article #3678), contact Illumina Technical Support* [*techsupport@illumina.com*](mailto:techsupport@illumina.com?subject=Question%2FFeedback%20Regarding%20Illumina%20Knowledge%20Article%20#000003678%20-%20Software%20\&body=Dear%20Illumina%20Technical%20Support,%0D%0A%0D%0A)*.* |


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