> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/software/basespace-sequence-hub.md).

# BaseSpace Sequence Hub

- [Reference Material](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list.md)
- [How to accept BaseSpace transfer ownership requests in a workgroup context](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000009086.md)
- [How to change ownership of a BaseSpace Professional Workgroup or Enterprise Domain](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000007942.md)
- [How to install the BaseSpace Sequence Hub Downloader on Mac OS](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000003049.md)
- [How to share BaseSpace sequencing runs and project data using 'Get Link' option](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000001597.md)
- [How to transfer data in BaseSpace from Public Domain to Enterprise Domain](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000003654.md)
- [How to unlock a Biosample in BaseSpace that is locked due to Biosample Data Aggregation](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000003653.md)
- [Transferring data between a personal account and a Professional workgroup in BaseSpace Sequence Hub](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000001798.md)
- [What is restricted when a BaseSpace Basic user exceeds 1TB storage limit](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-reference_material-list/000005662.md)
- [FAQ](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-faq-list.md)
- [What are the different BaseSpace Account Types?](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-faq-list/000002846.md)
- [What is the BaseSpace data deletion policy?](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-faq-list/000002847.md)
- [Troubleshooting](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-troubleshooting-list.md)
- [How to demultiplex mixed libraries on the same lane in BaseSpace Sequence Hub](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-troubleshooting-list/000002853.md)
- [How to recover a BaseSpace password reset email](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-troubleshooting-list/000003658.md)
- [Requirements for uploading FASTQ Files to BaseSpace via web interface](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-troubleshooting-list/000001313.md)
- [What to do if a BaseSpace analysis is stuck or stalled running](https://knowledge.illumina.com/software/basespace-sequence-hub/software-basespace-sequence-hub-troubleshooting-list/000007380.md)


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