> For the complete documentation index, see [llms.txt](https://knowledge.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://knowledge.illumina.com/instrumentation/miseq-i100-series/instrumentation-miseq-i100-series-reference_material-list/000010140.md).

# How to Populate the Indexes Tab in Sequencing Analysis Viewer (SAV) for MiSeq i100 Runs

**Background**

On the MiSeq i100, the file containing the index demultiplexing metrics, named **IndexMetricsOut.bin**, is generated in the Demux folder within the Analysis folder at the following path:

//\[server]/\[share]/\[output-directory]/\[RunId]/Analysis/\[#]/Data/Demux/IndexMetricsOut.bin

Sequencing Analysis Viewer (SAV) only retrieves metrics data from the InterOp folder.

**How to Populate the Indexes Tab**

To visualize the index demultiplexing metrics in SAV, the **IndexMetricsOut.bin** file must be copied to the **InterOp** folder.

1. Navigate to the **Demux** folder within the run directory: //\[server]/\[share]/\[output-directory]/\[RunId]/Analysis/\[#]/Data/Demux
2. Copy the **IndexMetricsOut.bin** file and paste it into the **InterOp** folder:

* //\[server]/\[share]/\[output-directory]/\[RunId]/InterOp

3. Reopen or refresh SAV. The index demultiplexing metrics should then appear in the Indexes tab.

\
\
\ <br>

|                                                                                                                                                                                                                                                                                                                                                                         |
| :---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------: |
| *For any feedback or questions regarding this article (Illumina Knowledge Article #10140), contact Illumina Technical Support* [*techsupport@illumina.com*](mailto:techsupport@illumina.com?subject=Question%2FFeedback%20Regarding%20Illumina%20Knowledge%20Article%20#000010140%20-%20Instrumentation%20\&body=Dear%20Illumina%20Technical%20Support,%0D%0A%0D%0A)*.* |


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://knowledge.illumina.com/instrumentation/miseq-i100-series/instrumentation-miseq-i100-series-reference_material-list/000010140.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
